Taxonomic assignment report

Facility	Hogwarts
Analyst	John Doe
Analysis started	2025-04-03 05:39:46
Analysis completed	2025-04-03 05:39:46
Wall time	0:0:0 hours

Sample details

locus	rbcL
preliminary_id	Planta
taxa_of_interest	Nicotiana tabacum
country	Indonesia
host	NA
sample_id	MP23-0431_rbcL
Query DNA sequence

Result overview

Inconclusive
The analyst should attempt subjective species identification at the genus level.
Reasoning - Flag 1C: >3 candidate species matched with high stringency (identity ≥ 98.5%).

Preliminary morphology ID confirmed	NA
Inconclusive taxonomic identity (Flag 1C)

Taxa of interest ruled out	False
Flag 2B: Taxon of interest detected Flag 5.1A: The given locus for this taxon is well represented in reference database (>5 entries) Flag 5.2B: 10-90% of related taxa have reference sequence(s) at the given locus

Analyst evaluation

Identification of candidate species

Flag 1C: The analyst should attempt subjective species identification at the genus level
>3 candidate species matched with high stringency (identity ≥ 98.5%)

Candidate hits must meet ONE of these criteria:

Minimum alignment length	`400bp`
Minimum query coverage	`85.0%`

Candidate hits are then classified as follows:

Classification	Alignment identity	Number of hits	Number of species
STRONG MATCH	≥ 98.5%	499	201
MODERATE MATCH	≥ 93.5%	NA	NA
NO MATCH	< 93.5%

Hits per candidate species (top 10 candidates only)

Species	Hits	Identity
Nicotiana sylvestris	2	99.7%
Nicotiana knightiana	1	99.7%
Nicotiana tabacum	13	99.7%
Nicotiana paniculata	1	99.7%
Nicotiana rustica	1	99.7%
Nicotiana glauca	2	99.6%
Nicotiana attenuata	3	99.6%
Nicotiana suaveolens	1	99.5%
Nicotiana amplexicaulis	1	99.5%
Nicotiana benthamiana	1	99.5%

#	Accession	Hit subject	Align length	Query coverage	Score	E-value	Identity
1	KM025249	Nicotiana sylvestris ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	947.0	0.00e+00	99.7%
2	BK010737	TPA_asm: Nicotiana knightiana chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
3	AP019624	Nicotiana tabacum apxA_T2_120719 chloroplast DNA, complete genome	955	100.0%	947.0	0.00e+00	99.7%
4	OQ473890	Nicotiana tabacum isolate PilotoCubano chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
5	AP019623	Nicotiana tabacum SR1_120719 chloroplast DNA, complete genome	955	100.0%	947.0	0.00e+00	99.7%
6	MZ707522	Nicotiana tabacum chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
7	KU199713	Nicotiana tabacum cultivar TN90 plastid, complete genome	955	100.0%	947.0	0.00e+00	99.7%
8	NC_007500	Nicotiana sylvestris chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
9	NC_001879	Nicotiana tabacum plastid, complete genome	955	100.0%	947.0	0.00e+00	99.7%
10	OQ473888	Nicotiana tabacum isolate Hainan2 chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
11	OQ473889	Nicotiana tabacum isolate Hainan3 chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
12	AP019625	Nicotiana tabacum apxC_T2_120719 chloroplast DNA, large circle chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
13	BK010741	TPA_asm: Nicotiana paniculata chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
14	OQ473886	Nicotiana tabacum isolate 7-CX14 chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
15	OQ473887	Nicotiana tabacum isolate 189802E-Habana2000 chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
16	BK010738	TPA_asm: Nicotiana rustica chloroplast, complete genome	955	100.0%	947.0	0.00e+00	99.7%
17	NC_056979	Nicotiana glauca chloroplast, complete genome	955	100.0%	944.0	0.00e+00	99.6%
18	MG182422	Nicotiana attenuata chloroplast, complete genome	955	100.0%	944.0	0.00e+00	99.6%
19	JF419563	Nicotiana attenuata ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, complete cds; chloroplast	955	100.0%	944.0	0.00e+00	99.6%
20	NC_035952	Nicotiana attenuata chloroplast, complete genome	955	100.0%	944.0	0.00e+00	99.6%
21	BK010740	TPA_asm: Nicotiana glauca chloroplast, complete genome	955	100.0%	944.0	0.00e+00	99.6%
22	NC_056978	Nicotiana suaveolens chloroplast, complete genome	955	100.0%	941.0	0.00e+00	99.5%
23	NC_056976	Nicotiana amplexicaulis chloroplast, complete genome	955	100.0%	941.0	0.00e+00	99.5%
24	LT576836	Nicotiana tabacum chloroplast rbcL gene for Rubisco large subunit, cultivar Petit-Havana	955	100.0%	941.0	0.00e+00	99.5%
25	LC617401	Nicotiana benthamiana NbWT_20_0_01 chloroplast rbcL gene for ribulose-1,5-bisphosphate carboxylase/oxygenase, complete cds	955	100.0%	941.0	0.00e+00	99.5%
26	U08608	Anthocercis viscosa chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	941.0	0.00e+00	99.5%
27	J01450	Nicotiana tabacum coupling factor beta-subunit gene, partial cds; and ribulose-1,5-biphosphate carboxylase/ oxygenase large subunit gene, complete cds; chloroplast genes for chloroplast products	955	100.0%	941.0	0.00e+00	99.5%
28	NC_056977	Nicotiana debneyi chloroplast, complete genome	955	100.0%	941.0	0.00e+00	99.5%
29	MT596796	Plastid transformation vector pLEV IR-coS, complete sequence	953	99.8%	939.0	0.00e+00	99.5%
30	D70815	Nicotiana debneyi chloroplast rbcL gene for ribulose -1,5-bisphosphate carboxylase/oxygenase large subunit, complete cds	955	100.0%	938.0	0.00e+00	99.4%
31	NC_029746	Iochroma cardenasianum chloroplast, complete genome	955	100.0%	938.0	0.00e+00	99.4%
32	M16896	Tobacco (N.acuminata) ribulose 1,5-bisphosphate carboxylase large subunit (rbcL) gene, complete cds	955	100.0%	938.0	0.00e+00	99.4%
33	KM360660	Atropa belladonna ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; plastid	955	100.0%	938.0	0.00e+00	99.4%
34	NC_004561	Atropa belladonna chloroplast, complete genome	955	100.0%	938.0	0.00e+00	99.4%
35	AY558863	Cuscuta compacta ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	938.0	0.00e+00	99.4%
36	PV078024	Mandragora officinarum voucher personal collection:JeremyBechelli:04-SSU chloroplast, complete genome	955	100.0%	938.0	0.00e+00	99.4%
37	U08609	Atropa belladonna chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	938.0	0.00e+00	99.4%
38	PV078023	Mandragora turcomanica voucher personal collection:JeremyBechelli:06-SSU chloroplast, complete genome	955	100.0%	938.0	0.00e+00	99.4%
39	LC649170	Nicotiana plumbaginifolia YN25 chloroplast, complete genome	955	100.0%	938.0	0.00e+00	99.4%
40	BK010739	TPA_asm: Nicotiana obtusifolia chloroplast, complete genome	952	99.7%	935.0	0.00e+00	99.4%
41	MN218090	Solanum sisymbriifolium isolate NN15 chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
42	JN563930	Synthetic construct Nicotiana undulata chloroplast clone pCK2-6, complete sequence	955	100.0%	935.0	0.00e+00	99.3%
43	MZ221862	Solanum sisymbriifolium voucher E:Sarkinen et al. 4536 chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
44	NC_030282	Scopolia parviflora chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
45	NC_062492	Lycianthes radiata voucher E:Gonzales 2039 chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
46	U08614	Mandragora officinalis chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	935.0	0.00e+00	99.3%
47	NC_016068	Nicotiana undulata chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
48	XM_033661133	PREDICTED: Nicotiana tomentosiformis ribulose bisphosphate carboxylase large chain (LOC117281257), mRNA	955	100.0%	935.0	0.00e+00	99.3%
49	MW470952	Anisodus luridus chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
50	PV078025	Mandragora autumnalis voucher personal collection:JeremyBechelli:03-SSU chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
51	NC_007602	Nicotiana tomentosiformis chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
52	MH360735	Hyoscyamus niger ribulose-1,5-biphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	935.0	0.00e+00	99.3%
53	NC_061213	Solanum sisymbriifolium chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
54	NC_024261	Hyoscyamus niger chloroplast, complete genome	955	100.0%	935.0	0.00e+00	99.3%
55	MN262642	Physochlaina physaloides chloroplast, complete genome	954	99.9%	934.0	0.00e+00	99.3%
56	NC_044154	Physochlaina orientalis chloroplast, complete genome	954	99.9%	934.0	0.00e+00	99.3%
57	U08620	Solandra grandiflora chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	952	99.7%	932.0	0.00e+00	99.3%
58	NC_041604	Solanum etuberosum voucher PI 498311 plastid, complete genome	955	100.0%	932.0	0.00e+00	99.2%
59	NC_063110	Scopolia carniolica chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
60	KM025251	Nicotiana tomentosiformis ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	932.0	0.00e+00	99.2%
61	U08611	Datura stramonium chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	932.0	0.00e+00	99.2%
62	MW324578	Przewalskia tangutica chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
63	MN165114	Nicandra physalodes chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
64	MZ221881	Solanum etuberosum voucher E:Gardner et al. 111 chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
65	MW042817	Solanaceae sp. YYL-2022 cultivar Henan chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
66	PP234564	Przewalskia tangutica isolate p53 chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
67	MZ450974	Hyoscyamus muticus chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
68	NC_036733	Przewalskia tangutica chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
69	NC_041622	Solanum palustre voucher PI 245763 plastid, complete genome	955	100.0%	932.0	0.00e+00	99.2%
70	U08615	Nicandra physalodes chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	932.0	0.00e+00	99.2%
71	ON509842	Solanum etuberosum voucher PI 558288 chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
72	OM638061	Solanum etuberosum chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
73	NC_062874	Solanum anomalostemon voucher BM:Knapp 10364 chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
74	NC_086882	Mandragora caulescens chloroplast, complete genome	955	100.0%	932.0	0.00e+00	99.2%
75	MT610897	Datura stramonium chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
76	NC_056981	Nicotiana repanda chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
77	KT178123	Solanum rostratum voucher Aust 178 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; plastid	955	100.0%	929.0	0.00e+00	99.1%
78	NC_018117	Datura stramonium chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
79	MK347419	Anisodus tanguticus chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
80	MK244356	Datura stramonium voucher QRI 540 ribulose-1,5-biphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	929.0	0.00e+00	99.1%
81	OK040953	Datura metel chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
82	NC_057245	Solanum rostratum chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
83	NC_056980	Nicotiana stocktonii chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
84	MT610896	Datura stramonium chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
85	OM616889	Datura stramonium isolate MSH-DS19 ribulose-1,5-biphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	929.0	0.00e+00	99.1%
86	JN662489	Datura stramonium isolate NN003 chloroplast, complete genome	955	100.0%	929.0	0.00e+00	99.1%
87	MH021551	Solanum sogarandinum plastid, complete genome	955	100.0%	926.0	0.00e+00	99.0%
88	NC_029833	Iochroma australe chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
89	KX086685	Solanum pennellii isolate TGRC LA1272 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
90	NC_030177	Iochroma ellipticum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
91	MN990084	Solanum pennellii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
92	OR400641	Eriolarynx lorentzii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
93	OR426647	Withania sp. chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
94	KU310654	Iochroma lehmannii plastid, complete genome	955	100.0%	926.0	0.00e+00	99.0%
95	NC_026880	Solanum neorickii isolate TS-146 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
96	MG946933	Withania adpressa ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
97	NC_030044	Iochroma umbellatum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
98	NC_062081	Solanum huaylasense chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
99	NC_026694	Saracha punctata chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
100	NC_062080	Solanum corneliomuelleri chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
101	NC_026881	Solanum peruvianum isolate TS-404 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
102	NC_026877	Solanum chilense isolate TS-408 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
103	KT178124	Solanum triflorum voucher Aust 161 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; plastid	955	100.0%	926.0	0.00e+00	99.0%
104	LC487531	Datura metel chloroplast rbcL gene, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial sequence	955	100.0%	926.0	0.00e+00	99.0%
105	BK010849	TPA_asm: Withania riebeckii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
106	NC_069556	Datura metel chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
107	MT811797	Solanum neorickii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
108	MG946934	Withania coagulans ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
109	NC_030178	Iochroma cyaneum voucher Smith 265 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
110	NC_027177	Iochroma tingoanum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
111	NC_030056	Acnistus arborescens x Iochroma cyaneum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
112	NC_026567	Iochroma nitidum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
113	U08616	Nolana spathulata chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	926.0	0.00e+00	99.0%
114	NC_030167	Iochroma lehmannii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
115	NC_035742	Solanum pennellii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
116	NC_030171	Eriolarynx fasciculata chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
117	M16867	Tobacco (N.otophora) ribulose 1,5-bisphosphate carboxylase large subunit (rbcL) gene, complete cds	955	100.0%	926.0	0.00e+00	99.0%
118	KX086691	Solanum lycopersicoides isolate TGRC LA2951 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
119	BK010847	TPA_asm: Withania adpressa chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
120	MG946935	Withania coagulans ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
121	NC_027099	Dunalia solanacea chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
122	KX086696	Solanum arcanum isolate TGRC LA2153 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
123	NC_030168	Iochroma salpoanum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
124	HG975452	Solanum pennellii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
125	NC_066481	Anisodus acutangulus chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
126	NC_062867	Solanum aligerum voucher BM:Knapp et al. 10436 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
127	NC_026563	Dunalia obovata chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
128	OQ473544	Solanum chilense chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
129	NC_062079	Solanum chmielewskii chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
130	NC_086523	Solanum anamatophilum voucher CIP 761555 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
131	NC_026574	Iochroma stenanthum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
132	OQ473540	Solanum habrochaites chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
133	NC_044471	Atropanthe sinensis chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
134	KX086690	Solanum sitiens isolate TGRC LA4115 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	926.0	0.00e+00	99.0%
135	NC_062486	Solanum nitidum voucher E:Sarkinen et al. 4851 chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
136	NC_026726	Iochroma loxense chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
137	NC_062078	Solanum arcanum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
138	NC_030185	Acnistus arborescens chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
139	MN781973	Anisodus acutangulus chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
140	OR360843	Trozelia umbellata chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
141	OR400640	Discopodium penninervium chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
142	NC_047176	Withania coagulans chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
143	MK142783	Withania somnifera chloroplast clone 154386, complete genome	955	100.0%	926.0	0.00e+00	99.0%
144	KU306396	Iochroma cyaneum chloroplast, complete genome	955	100.0%	926.0	0.00e+00	99.0%
145	AB051021	Nolana albescens chloroplast rbcL gene for ribulose-1,5-bisphosphate carboxylase/oxygenase, partial cds	953	99.8%	924.0	0.00e+00	99.0%
146	AB051025	Lycium pallidum chloroplast rbcL gene for ribulose-1,5-bisphosphate cerboxylase/oxygenase, partial cds	953	99.8%	924.0	0.00e+00	99.0%
147	KP294521	Vassobia dichotoma chloroplast, complete genome	952	99.7%	923.0	0.00e+00	99.0%
148	MZ221921	Solanum medians voucher E:Gonzales et al. 9 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
149	MH021451	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
150	ON509847	Solanum x curtilobum voucher PI 604207 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
151	NC_086548	Solanum morelliforme voucher CIP 764271 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
152	NC_062863	Jaltomata sinuosa chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
153	OM638073	Solanum bulbocastanum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
154	MH021410	Solanum andreanum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
155	ON509711	Solanum berthaultii voucher CIP 760257 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
156	MH021545	Solanum phureja plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
157	NC_041607	Solanum stenotomum voucher PI 320364 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
158	OM638079	Solanum tuberosum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
159	NC_086524	Solanum wittmackii voucher CIP 762077 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
160	ON509750	Solanum medians voucher CIP 761503 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
161	NC_062870	Solanum boliviense voucher CORD:Barboza et al. 3562 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
162	NC_041603	Solanum chomatophilum voucher PI 365328 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
163	OR632701	Solanum tuberosum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
164	NC_041620	Solanum multiinterruptum voucher PI 210044 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
165	ON509811	Solanum albornozii voucher CIP 763735 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
166	MH021401	Solanum acroglossum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
167	MH021510	Solanum marinasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
168	NC_041625	Solanum phureja voucher PI 195191 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
169	MH021530	Solanum multiinterruptum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
170	MH021431	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
171	OM638058	Solanum cajamarquense chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
172	MH021434	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
173	MT120860	Solanum bukasovii isolate BUK1 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
174	NC_041621	Solanum bukasovii f. multidissectum voucher PI 210052 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
175	MK690622	Solanum cardiophyllum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
176	MH021432	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
177	ON509782	Solanum multiinterruptum voucher CIP 762407 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
178	MH021449	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
179	NC_041590	Solanum albornozii voucher PI 498206 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
180	NC_041591	Solanum ambosinum voucher PI 365317 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
181	MH021518	Solanum megistacrolobum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
182	ON509767	Solanum chomatophilum voucher CIP 762055 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
183	OM638069	Solanum raphanifolium chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
184	MH021437	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
185	ON509766	Solanum chiquidenum voucher CIP 762052 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
186	NC_069602	Solanum piurae chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
187	NC_041613	Solanum jamesii voucher PI 641944 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
188	OM302453	Solanum candolleanum voucher SC4-1 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
189	ON509807	Solanum candolleanum voucher CIP 763651 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
190	OM638067	Solanum paucissectum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
191	NC_041588	Solanum acroglossum voucher PI 365313 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
192	NC_069604	Solanum tarnii x Solanum tuberosum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
193	OM638055	Solanum bukasovii chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
194	NC_050208	Solanum x juzepczukii isolate JUZ chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
195	PP234974	Solanum aculeatissimum voucher LXP-13-07963 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
196	ON509697	Solanum tuberosum voucher CIP 703514 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
197	MH021448	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
198	ON509795	Solanum chomatophilum voucher CIP 762615 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
199	NC_086545	Solanum trifidum voucher CIP 764145 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
200	NC_041599	Solanum cajamarquense voucher PI 230522 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
201	NC_050207	Solanum tuberosum subsp. andigenum isolate ADG1 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
202	ON509824	Solanum morelliforme voucher CIP 764293 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
203	MH021566	Solanum stenotomum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
204	ON509775	Solanum medians voucher CIP 762256 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
205	NC_041626	Solanum pinnatisectum voucher PI 253214 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
206	OR360844	Schraderanthus viscosus chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
207	MH021519	Solanum megistacrolobum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
208	MH021438	Solanum bulbocastanum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
209	NC_041617	Solanum limbaniense voucher PI 473468 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
210	OM638066	Solanum megistacrolobum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
211	ON509754	Solanum lignicaule voucher CIP 761652 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
212	ON509751	Solanum candolleanum voucher CIP 761510 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
213	ON509685	Solanum tuberosum voucher CIP 703308 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
214	MH021435	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
215	ON509763	Solanum bulbocastanum voucher CIP 761933 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
216	ON509691	Solanum tuberosum voucher CIP 703433 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
217	MH021506	Solanum leptophyes plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
218	ON509757	Solanum candolleanum voucher CIP 761739 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
219	MH021447	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
220	ON509768	Solanum candolleanum voucher CIP 762068 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
221	NC_069597	Solanum chiquidenum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
222	NC_086550	Solanum ehrenbergii voucher PI 275216 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
223	XM_059432982	PREDICTED: Lycium ferocissimum ribulose bisphosphate carboxylase large chain (LOC132042439), mRNA	955	100.0%	923.0	0.00e+00	98.8%
224	ON509791	Solanum cajamarquense voucher CIP 762608 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
225	KT178121	Physalis virginiana voucher Aust 157 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; plastid	955	100.0%	923.0	0.00e+00	98.8%
226	MH021433	Solanum bukasovii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
227	ON509770	Solanum wittmackii voucher CIP 762093 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
228	NC_041596	Solanum stenophyllidium voucher PI 320265 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
229	ON509792	Solanum chomatophilum voucher CIP 762611 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
230	ON509779	Solanum acaule voucher CIP 762345 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
231	ON509790	Solanum chomatophilum voucher CIP 762576 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
232	OM638050	Solanum acaule chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
233	NC_041587	Solanum achacachense voucher PI 558032 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
234	OP056022	Solanum tuberosum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
235	OM638070	Solanum raphanifolium chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
236	ON509724	Solanum medians voucher CIP 760415 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
237	ON509759	Solanum candolleanum voucher CIP 761827 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
238	NC_041595	Solanum x blanco-galdosii voucher PI 498214 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
239	KX086697	Solanum habrochaites isolate TGRC LA2196 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	923.0	0.00e+00	98.8%
240	NC_041619	Solanum megistacrolobum voucher PI 210034 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
241	MH021408	Solanum ambosinum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
242	MT120867	Solanum bukasovii isolate BUK2 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
243	NC_068253	Solanum raphanifolium voucher SR1 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
244	NC_041610	Solanum marinasense voucher PI 498255 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
245	ON509802	Solanum stipuloideum voucher CIP 763111 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
246	ON509720	Solanum candolleanum voucher CIP 760337 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
247	MH021526	Solanum multiinterruptum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
248	NC_062506	Solanum candolleanum voucher BM:Knapp et al. 10251 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
249	MH021442	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
250	MH021443	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
251	ON509849	Solanum tuberosum voucher PI 607886 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
252	ON509704	Solanum chomatophilum voucher CIP 760056 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
253	ON509774	Solanum medians voucher CIP 762218 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
254	MH021446	Solanum canasense plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
255	MH021570	Solanum stenotomum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
256	NC_041611	Solanum hypacrarthrum voucher PI 473477 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
257	MH021543	Solanum phureja plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
258	MT120862	Solanum tuberosum subsp. andigenum isolate ADG2 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
259	NC_041551	Solanum acaule chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
260	OM638082	Solanum tacnaense chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
261	ON509844	Solanum x juzepczukii voucher PI 599259 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
262	OR360845	Oryctes nevadensis chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
263	XM_059436179	PREDICTED: Lycium ferocissimum ribulose bisphosphate carboxylase large chain (LOC132045594), mRNA	955	100.0%	923.0	0.00e+00	98.8%
264	MH021404	Solanum ambosinum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
265	NC_086521	Solanum huancabambense voucher CIP 760955 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
266	ON509839	Solanum tuberosum voucher PI 546023 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
267	NC_041586	Solanum abancayense voucher PI 458403 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
268	MH021541	Solanum phureja plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
269	NC_026879	Solanum habrochaites isolate TS-407 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
270	ON509771	Solanum multiinterruptum voucher CIP 762103 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
271	OQ473543	Solanum habrochaites chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
272	OM638052	Solanum acaule chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
273	NC_026906	Dunalia brachyacantha chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
274	MZ233590	Solanum pinnatisectum voucher SP-10 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
275	NC_061388	Solanum aculeatissimum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
276	MH021493	Solanum jamesii plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
277	MH021539	Solanum phureja plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
278	MH021527	Solanum multiinterruptum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
279	ON509752	Solanum chomatophilum voucher CIP 761551 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
280	ON509834	Solanum jamesii voucher PI 458424 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
281	ON509740	Solanum chiquidenum voucher CIP 761069 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
282	NC_062469	Solanum trisectum voucher HFN:974750147 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
283	ON509793	Solanum chomatophilum voucher CIP 762613 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
284	ON509760	Solanum candolleanum voucher CIP 761843 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
285	OM638051	Solanum acaule chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
286	NC_062502	Solanum humectophilum voucher E:Sarkinen et al. 4625 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
287	ON509749	Solanum multiinterruptum voucher CIP 761424 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
288	MG946936	Withania frutescens ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	923.0	0.00e+00	98.8%
289	NC_069607	Solanum tarapatanum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
290	NC_041598	Solanum bukasovii voucher PI 266385 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
291	ON509713	Solanum boliviense voucher CIP 760279 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
292	ON509755	Solanum raphanifolium voucher CIP 761655 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
293	ON509829	Solanum raphanifolium voucher PI 296126 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
294	ON509748	Solanum boliviense voucher CIP 761384 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
295	MH021547	Solanum pinnatisectum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
296	NC_041600	Solanum canasense voucher PI 210035 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
297	MH021525	Solanum multiinterruptum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
298	ON509781	Solanum raphanifolium voucher CIP 762358 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
299	NC_007943	Solanum bulbocastanum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
300	MH021520	Solanum megistacrolobum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
301	ON509741	Solanum piurae voucher CIP 761072 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
302	NC_050205	Solanum ahanhuiri isolate AJH chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
303	NC_086525	Solanum augustii voucher CIP 762633 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
304	ON509794	Solanum chomatophilum voucher CIP 762614 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
305	MN866909	Lycium ferocissimum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
306	ON509843	Solanum x juzepczukii voucher PI 595438 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
307	MH021406	Solanum ambosinum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
308	ON509764	Solanum candolleanum voucher CIP 762001 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
309	ON509705	Solanum chomatophilum voucher CIP 760057 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
310	MH021411	Solanum andreanum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
311	NC_069599	Solanum gracilifrons chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
312	NC_041592	Solanum andreanum voucher PI 320345 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
313	OQ473541	Solanum peruvianum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
314	NC_069600	Solanum infundibuliforme chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
315	ON509805	Solanum multiinterruptum voucher CIP 763491 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
316	ON509700	Solanum ahanhuiri voucher CIP 706209 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
317	MH021569	Solanum stenophyllidium plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
318	OM638075	Solanum pinnatisectum chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
319	ON509722	Solanum raphanifolium voucher CIP 760351 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
320	MH021461	Solanum chomatophilum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
321	NC_041589	Solanum acroscopicum voucher PI 365314 plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
322	MT984233	Solanum habrochaites chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
323	MH021567	Solanum stenotomum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
324	MH021407	Solanum ambosinum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
325	ON509756	Solanum raphanifolium voucher CIP 761683 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
326	MH021421	Solanum stenophyllidium plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
327	MH021505	Solanum leptophyes plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
328	NC_069606	Solanum tacnaense chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
329	NC_086526	Solanum dolichocremastrum voucher CIP 762998 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
330	MK690624	Solanum jamesii chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
331	ON509690	Solanum tuberosum voucher CIP 703421 chloroplast, complete genome	955	100.0%	923.0	0.00e+00	98.8%
332	MH021524	Solanum bukasovii f. multidissectum plastid, complete genome	955	100.0%	923.0	0.00e+00	98.8%
333	AM235152	Lycium ferocissimum chloroplast partial rbcL gene for ribulose bisphosphate carboxylase large subunit, specimen voucher Balele K. 5 (NBG)	954	99.9%	922.0	0.00e+00	98.8%
334	OP028208	Physalis peruviana chloroplast, complete genome	952	99.7%	920.0	0.00e+00	98.8%
335	NC_026570	Physalis peruviana plastid, complete genome	952	99.7%	920.0	0.00e+00	98.8%
336	NC_062488	Solanum pachyandrum voucher BM:Sarkinen et al. 4546 chloroplast, complete genome	952	99.7%	920.0	0.00e+00	98.8%
337	KY887588	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
338	OQ473547	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
339	MH021549	Solanum polyadenium plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
340	NC_070364	Physalis philadelphica chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
341	KX086688	Solanum ochranthum isolate TGRC LA2161 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
342	OQ473536	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
343	MH021473	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
344	AB586586	Nicotiana sp. SH-2010 chloroplast gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial cds, isolate: T077	955	100.0%	920.0	0.00e+00	98.7%
345	NC_072167	Physalis cordata chloroplast, complete sequence	955	100.0%	920.0	0.00e+00	98.7%
346	NC_041618	Solanum medians voucher PI 210045 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
347	LC613092	Solanum lycopersicum CMS[P] chloroplast DNA, contig: CMS-PCp054, partial sequence	955	100.0%	1840.0	0.00e+00	98.7%
348	ON509733	Solanum polyadenium voucher CIP 760726 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
349	NC_026882	Solanum pimpinellifolium isolate TS-415 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
350	ON203960	Solanum capsicoides chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
351	MH021554	Solanum sparsipilum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
352	OQ473538	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
353	ON509717	Solanum brevicaule voucher CIP 760324 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
354	NC_062481	Solanum salicifolium voucher HFN:s.n. chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
355	NC_041628	Solanum sogarandinum voucher PI 230510 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
356	MH021523	Solanum bukasovii f. multidissectum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
357	KX086703	Solanum lycopersicum ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
358	KX086693	Solanum lycopersicum isolate TGRC LA1320 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
359	AC239738	Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-240p19 map 1, complete sequence	955	100.0%	920.0	0.00e+00	98.7%
360	MT811791	Solanum lycopersicum cultivar PDS chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
361	OQ473542	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
362	OQ473549	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
363	ON509718	Solanum brevicaule voucher CIP 760327 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
364	NC_062511	Solanum cantense voucher BM:Sarkinen et al. 4079 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
365	OQ473532	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
366	LC613093	Solanum lycopersicum CMS[P] chloroplast DNA, contig: CMS-PCp055, partial sequence	955	100.0%	920.0	0.00e+00	98.7%
367	NC_062489	Solanum paposanum voucher BM:Sarkinen et al. 4091 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
368	NC_062871	Solanum brachyantherum voucher E:Baines et al. 56 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
369	OR166175	Withania somnifera chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
370	MH021514	Solanum medians plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
371	ON509806	Solanum candolleanum voucher CIP 763648 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
372	NC_041629	Solanum sparsipilum voucher PI 246536 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
373	OQ473534	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
374	MH021488	Solanum incamayoense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
375	MH019242	Physalis peruviana chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
376	MT811790	Solanum lycopersicum cultivar Corbarino chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
377	MH021516	Solanum medians plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
378	MH021428	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
379	MZ221859	Solanum salicifolium voucher BM:Knapp 10492 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
380	MH021478	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
381	ON509723	Solanum lignicaule voucher CIP 760353 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
382	MH021491	Solanum incamayoense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
383	LC613099	Solanum lycopersicum O chloroplast DNA, contig: OCp002, partial sequence	955	100.0%	920.0	0.00e+00	98.7%
384	NC_062471	Solanum tweedianum voucher CORD:Barboza 2229 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
385	OQ473545	Solanum pimpinellifolium chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
386	OQ473527	Solanum pimpinellifolium chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
387	KP331414	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
388	MH021489	Solanum incamayoense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
389	ON509761	Solanum bulbocastanum voucher CIP 761896 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
390	ON509708	Solanum brevicaule voucher CIP 760235 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
391	NC_041601	Solanum cardiophyllum voucher PI 283062 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
392	MH021553	Solanum sparsipilum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
393	OQ473533	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
394	OQ473526	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
395	MH021471	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
396	MG946905	Withania somnifera ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
397	OQ473537	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
398	NC_085278	Physalis ixocarpa chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
399	KX086702	Solanum lycopersicum isolate UIB 1-30 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
400	LC613090	Solanum lycopersicum CMS[MSA1] chloroplast DNA, contig: CMS-MSA1Cp001, partial sequence	955	100.0%	1840.0	0.00e+00	98.7%
401	NC_041624	Solanum paucissectum voucher PI 473489 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
402	MT973500	Solanum pimpinellifolium chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
403	MG946897	Solanum virginianum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
404	OQ473529	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
405	MH021513	Solanum medians plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
406	OQ473539	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
407	OQ473521	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
408	NC_062873	Solanum annuum voucher CORD:Barboza 3017 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
409	MH021444	Solanum canasense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
410	NC_086547	Solanum lesteri voucher CIP 764266 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
411	MH021427	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
412	NC_062480	Solanum salamancae voucher CORD:Barboza 2182 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
413	U08618	Salpiglossis sinuata chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds	955	100.0%	920.0	0.00e+00	98.7%
414	MN192191	Physalis philadelphica cultivar Wild chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
415	KX086701	Solanum lycopersicum isolate UIB 1-48 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
416	NC_062508	Solanum capsicoides voucher E:Sarkinen et al. 4547 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
417	ON509826	Solanum medians voucher PI 265872 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
418	NC_007898	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
419	NC_062862	Jaltomata bicolor voucher E:Gonzales 2880 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
420	MH021529	Solanum bukasovii f. multidissectum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
421	LC613091	Solanum lycopersicum CMS[O] chloroplast DNA, contig: CMS-OCp001, partial sequence	955	100.0%	1840.0	0.00e+00	98.7%
422	MH021454	Solanum cardiophyllum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
423	PP471919	Physalis minima isolate R2 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
424	NC_039458	Physalis pruinosa chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
425	ON509747	Solanum lignicaule voucher CIP 761212 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
426	HG975525	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
427	ON509836	Solanum brevicaule voucher PI 473065 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
428	OQ473530	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
429	OM638077	Solanum sparsipilum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
430	NC_062477	Solanum remyanum voucher E:Baines et al. 115 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
431	ON509830	Solanum infundibuliforme voucher PI 458324 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
432	LC613098	Solanum lycopersicum O chloroplast DNA, contig: OCp001, partial sequence	955	100.0%	920.0	0.00e+00	98.7%
433	NC_041627	Solanum polyadenium voucher PI 161728 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
434	LC613095	Solanum pimpinellifolium LA1670 chloroplast DNA, contig: LA1670Cp001, partial sequence	955	100.0%	920.0	0.00e+00	98.7%
435	KX086699	Solanum galapagense isolate TGRC LA0930 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
436	MH021490	Solanum incamayoense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
437	OR166174	Withania somnifera chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
438	ON509719	Solanum brevicaule voucher CIP 760328 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
439	ON509706	Solanum brevicaule voucher CIP 760230 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
440	MT811792	Solanum lycopersicum cultivar Piennolo giallo chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
441	OQ473524	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
442	ON509762	Solanum bulbocastanum voucher CIP 761898 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
443	NC_026878	Solanum galapagense isolate TS-208 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
444	KY887587	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
445	OQ473522	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
446	OQ473528	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
447	ON509772	Solanum cantense voucher CIP 762130 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
448	NC_041616	Solanum leptophyes voucher PI 458378 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
449	LC613103	Solanum lycopersicum Sekai-ichi chloroplast DNA, contig: Sekai-ichiCp001, partial sequence	955	100.0%	1840.0	0.00e+00	98.7%
450	MH021511	Solanum marinasense plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
451	NC_062421	Solanum aureum voucher E:Balls 5826 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
452	MH021470	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
453	OQ473546	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
454	MH021436	Solanum bukasovii plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
455	ON509799	Solanum mochiquense voucher CIP 762989 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
456	MH021504	Solanum leptophyes plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
457	ON509701	Solanum paucissectum voucher CIP 760007 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
458	NC_062718	Solanum mochiquense voucher SM1-3 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
459	OR296714	Physalis ampla chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
460	MH045574	Physalis angulata chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
461	JF772171	Solanum tuberosum isolate RH89-039-16 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
462	AB586587	Physalis sp. SH-2010 chloroplast gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial cds, isolate: T964	955	100.0%	920.0	0.00e+00	98.7%
463	KX086692	Solanum pimpinellifolium isolate TGRC LA0114 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast	955	100.0%	920.0	0.00e+00	98.7%
464	NC_026876	Solanum cheesmaniae isolate TS-199 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
465	KP117024	Solanum lycopersicum isolate TS-321 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
466	OP748222	Physalis longifolia var. subglabrata chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
467	OQ473548	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
468	MH021424	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
469	MH021507	Solanum leptophyes plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
470	MT811798	Solanum pimpinellifolium chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
471	LC613100	Solanum lycopersicum P chloroplast DNA, contig: PCp001, partial sequence	955	100.0%	1840.0	0.00e+00	98.7%
472	OQ473531	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
473	NC_081500	Brugmansia arborea chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
474	MH021555	Solanum sparsipilum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
475	OQ473525	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
476	NC_069601	Solanum lignicaule chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
477	NC_041606	Solanum gourlayi voucher PI 472911 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
478	MH021426	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
479	AM087200	Solanum lycopersicum complete chloroplast genome, cultivar IPA-6	955	100.0%	920.0	0.00e+00	98.7%
480	OQ473535	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
481	OM257167	Physalis angulata var. villosa chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
482	MH021423	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
483	MH021469	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
484	MH021439	Solanum bulbocastanum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
485	MH021425	Solanum brevicaule plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
486	NC_041612	Solanum incamayoense voucher PI 473060 plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
487	MH021468	Solanum gourlayi plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
488	NC_062482	Solanum sanchez-vegae voucher E:Gonzales 2389 chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
489	OQ473523	Solanum lycopersicum chloroplast, complete genome	955	100.0%	920.0	0.00e+00	98.7%
490	MH021590	Solanum microdontum plastid, complete genome	955	100.0%	920.0	0.00e+00	98.7%
491	KC535803	Solanum nigrum isolate SN03 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	953	99.8%	918.0	0.00e+00	98.7%
492	NC_039415	Solanum usambarense voucher BM:Vorontsova et al. 166 chloroplast, complete genome	952	99.7%	917.0	0.00e+00	98.7%
493	NC_039608	Solanum aethiopicum voucher BM:Vorontsova et al. 156 chloroplast, complete genome	952	99.7%	917.0	0.00e+00	98.7%
494	MN218076	Solanum aethiopicum cultivar Yiliuliu isolate NN1 chloroplast, complete genome	952	99.7%	917.0	0.00e+00	98.7%
495	NC_039457	Physalis angulata chloroplast, complete genome	955	100.0%	919.0	0.00e+00	98.6%
496	L14403	Lycopersicon esculentum chloroplast ribulosebisphosphate carboxylase large subunit (rbcL) gene, partial cds	955	100.0%	919.0	0.00e+00	98.6%
497	MH360739	Solanum nigrum ribulose-1,5-biphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast	955	100.0%	917.0	0.00e+00	98.6%
498	NC_062472	Solanum umalilaense voucher HFN:A14750133 chloroplast, complete genome	955	100.0%	917.0	0.00e+00	98.6%
499	LC613096	Solanum lycopersicum var. cerasiforme LA1673 chloroplast DNA, contig: LA1673Cp001, partial sequence	955	100.0%	1828.0	0.00e+00	98.5%
500	LC613102	Solanum acaule chloroplast DNA, contig: SacauleCp001, partial sequence	955	100.0%	1758.0	0.00e+00	97.3%

Selected alignment

Selected taxonomy

Kingdom
Phylum
Class
Order
Family
Genus
Species

Boxplot of BLAST hit identity percent grouped by genus

The boxplot above shows the identity (%) of BLAST hits grouped by genus. Each data point shows the alignment identity between the query and matched reference sequence. The analyst may wish to use this to make a subjective genus-level identification for the sample.

Analyst evaluation

Taxa of interest

This sections shows the taxa of interest specified by the submitter. Each of these taxa has been cross-referenced against the candidate species to determine if they might match the taxonomic identity of the sample. A blank row indicates a TOI that did not match any candidate species, meaning that it is unlikely that the sample matches that TOI.

Taxon of interest	Match rank	Match taxon	Match species	Match accession	Match identity
Nicotiana tabacum	species	Nicotiana tabacum	Nicotiana tabacum	AP019624	0.997

See the Database coverage section to see database coverage for taxa of interest.

Reference sequence source diversity

This analysis evaluates how many independent sources have contributed to reference sequences for each candidate species. This provides a measure of confidence in the taxonomic annotation of references sequences. A sequence that has been annotated by multiple independent sources is more likely to have a correct taxonomic annotation.

Analyst evaluation

No candidate species to report on.

Database coverage of target taxa

The target taxa include candidate species, the preliminary morphology ID, and any taxa of interest provided by the submitter. Each of these taxa are independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of the target taxon. Insufficient coverage of a taxon can result in that taxon not be correctly identified as the taxonomic identity of the sample. For example, if the sample is Homo sapiens, but Homo sapiens sequences are not included in the reference database, the analysis will be unable to identity Homo sapiens as the correct taxonomic identity, and will most likely assign the closest relative with reference data as the taxonomic identity.

Analyst evaluation

Preliminary ID

Taxa of interest

Database coverage

Flag 5.1C: The reference database is likely to be unreliable for this species
Reasoning: The given locus for this taxon is not present in reference database (0 entries)

Database coverage of Planta

Flag 5.1C: The reference database is likely to be unreliable for this species
Reasoning: The given locus for this taxon is not present in reference database (0 entries)

0 records

There are 0 sequences in the reference database for Planta at the given locus rbcL.

Database coverage of species in genus Planta

Flag 5.2C: The database has poor support for species in this genus
Reasoning: ≤10% of taxon have reference sequence(s) at the given locus

/ (%) sequence records were found in the reference database for:

Species in the genus Planta
At the target locus rbcL

Number of GenBank records at locus rbcL

Database coverage of species in genus Planta that occur in country of origin

Flag 5.3C: Probability that a different related species from the country of origin is the true taxonomic identity: LOW
Reasoning: No species in genus have been observed in the country of origin

/ (%) sequence records were found in the reference database for:

Species in the genus Planta
At the target locus rbcL
In the sample country of origin Indonesia

Number of GenBank records at locus rbcL

Database coverage

Flag 5.2B: The database has some support for species in this genus
Reasoning: 10-90% of related taxa have reference sequence(s) at the given locus

Database coverage of Nicotiana tabacum

Flag 5.1A: The reference data supports this taxon well
Reasoning: The given locus for this taxon is well represented in reference database (>5 entries)

28 records

There are 28 sequences in the reference database for Nicotiana tabacum at the given locus rbcL.

Database coverage of species in genus Nicotiana

Flag 5.2B: The database has some support for species in this genus
Reasoning: 10-90% of related taxa have reference sequence(s) at the given locus

/ (%) sequence records were found in the reference database for:

Species in the genus Nicotiana
At the target locus rbcL

Number of GenBank records at locus rbcL

Database coverage of species in genus Nicotiana that occur in country of origin

Flag 5.3A: Probability that a different related species from the country of origin is the true taxonomic identity: LOW
Reasoning: All species in genus from country of origin have reference sequence(s) for this locus

/ (%) sequence records were found in the reference database for:

Species in the genus Nicotiana
At the target locus rbcL
In the sample country of origin Indonesia

Number of GenBank records at locus rbcL

Intraspecies diversity

This section provides a phylogeny of the candidate reference sequences. The analyst can use this to make a subjective observation on how well the reference sequences are able to distinguish between species. If the phylogeny shows distinct clades for each species, we can be confident that the molecular data are capable of distinguishing between those species. However, if the phylogeny shows overlap between species, this reduces the capacity of the molecular data to confidently distinguish between those species. In some cases, we may see the query sequence falling outside of the adjacent species' clades, which indicates that our query species is not represented in the reference database, which could indicate a rare or novel species.

Analyst evaluation

Click + drag to pan
Scroll to zoom in/out

	Vertical space
	Horizontal space

The phylogetic tree was constructed with FastME using the Neighbor-Joining method. Multiple-sequence alignment of the candidate reference sequences was performed using MAFFT. The visualization is rendered with TidyTree.

Taxonomy Check

The following resources can be used to ensure that the given taxonomy is legitimate and current.

Taxa	Database
General	GBIF
General	ITIS
Mealybugs & scale	ScaleNet database
Thrips	Thripswiki
Spider Mites	Spider Mites Database
Psocodea (Barklice, Booklice, and Parasitic Lice)	Psocodea Species File Online
Orthoptera	Orthoptera Species File Online
Drosophilidae	TaxoDros
Diptera	Catalog of the Diptera of the Australasian and Oceanian Regions Systema Dipterorum
Aphids	Aphid Species File
Ants	AntWeb AntCat
Lepidoptera (butterflies and moths)	The Global Lepidoptera Names Index
Gracillariidae (primitive moths)	Global Taxonomic Database of Gracillariidae
Pyralidae (pyralid moths)	Global Information System on Pyraloidea
Tortricidae (tortrix moths)	Tortricidae Resources on the Net

Taxonomic assignment report

Sample details

Input DNA sequence

Result overview

Analyst evaluation

Identification of candidate species

BLAST search results

Analyst evaluation

Taxa of interest

Reference sequence source diversity

Analyst evaluation

Database coverage of target taxa

Analyst evaluation

Database coverage of Planta

Database coverage of species in genus Planta

Per-species reference sequence counts

Database coverage of species in genus Planta that occur in country of origin

Per-species reference sequence counts

Database coverage of Nicotiana tabacum

Database coverage of species in genus Nicotiana

Per-species reference sequence counts

Database coverage of species in genus Nicotiana that occur in country of origin

Per-species reference sequence counts

Intraspecies diversity

Analyst evaluation

Taxonomy Check